STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2099Toluene tolerance protein Ttg2C. (159 aa)    
Predicted Functional Partners:
LHA_2098
Signal peptide protein, toluene tolerance protein Ttg2D.
 
 0.999
yrbE-2
Toluene transporter subunit: membrane component of ABC superfamily; Function of strongly homologous gene; transporter.
 
 0.999
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily; Function of strongly homologous gene; transporter.
 
 0.999
LHA_2097
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 0.995
LHA_2672
ABC transporter, permease.
 
 0.992
LHA_2673
Uncharacterized ABC transporter ATP-binding protein HI_1087.
 
 0.985
LHA_2674
ABC transport system periplasmic substrate binding protein.
     
  0.900
LHA_2096
Homologs of previously reported genes of unknown function; Belongs to the BolA/IbaG family.
     
 0.879
LHA_0755
Homologs of previously reported genes of unknown function.
 
   
 0.875
LHA_2094
Putative NIF3-like protein 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.861
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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