rtcB protein (Legionella hackeliae) - STRING interaction network

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[Homology]

Score

rtcB

Homologs of previously reported genes of unknown function; Belongs to the RtcB family. (471 aa)

Predicted Functional Partners:

LHA_2112

0.996

LHA_2114

0.597

prfB

0.533

LHA_0658

0.444

LHA_0803

0.443

dbpA

0.443

rhlE

0.443

deaD

0.443

Your Current Organism:

Legionella hackeliae

NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LHA_0658	rtcB	LHA_0658	LHA_2113	Conserved protein of unknown function; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	0.444
LHA_0803	rtcB	LHA_0803	LHA_2113	Protein of unknown function; No homology to any previously reported sequences.	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	0.443
LHA_2112	LHA_2114	LHA_2112	LHA_2114	Homologs of previously reported genes of unknown function.	DEAD/DEAH box helicase-like protein.	0.541
LHA_2112	rtcB	LHA_2112	LHA_2113	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	0.996
LHA_2114	LHA_2112	LHA_2114	LHA_2112	DEAD/DEAH box helicase-like protein.	Homologs of previously reported genes of unknown function.	0.541
LHA_2114	rtcB	LHA_2114	LHA_2113	DEAD/DEAH box helicase-like protein.	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	0.597
dbpA	prfB	LHA_1104	LHA_2245	ATP-independent RNA helicase dbpA; Belongs to the DEAD box helicase family.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.400
dbpA	rtcB	LHA_1104	LHA_2113	ATP-independent RNA helicase dbpA; Belongs to the DEAD box helicase family.	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	0.443
deaD	prfB	LHA_2352	LHA_2245	Cold-shock DEAD box protein A homolog; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.400
deaD	rtcB	LHA_2352	LHA_2113	Cold-shock DEAD box protein A homolog; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	0.443
prfB	dbpA	LHA_2245	LHA_1104	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	ATP-independent RNA helicase dbpA; Belongs to the DEAD box helicase family.	0.400
prfB	deaD	LHA_2245	LHA_2352	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	Cold-shock DEAD box protein A homolog; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	0.400
prfB	rhlE	LHA_2245	LHA_2138	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family.	0.400
prfB	rtcB	LHA_2245	LHA_2113	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	0.533
rhlE	prfB	LHA_2138	LHA_2245	ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.400
rhlE	rtcB	LHA_2138	LHA_2113	ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family.	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	0.443
rtcB	LHA_0658	LHA_2113	LHA_0658	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	Conserved protein of unknown function; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.	0.444
rtcB	LHA_0803	LHA_2113	LHA_0803	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	Protein of unknown function; No homology to any previously reported sequences.	0.443
rtcB	LHA_2112	LHA_2113	LHA_2112	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	Homologs of previously reported genes of unknown function.	0.996
rtcB	LHA_2114	LHA_2113	LHA_2114	Homologs of previously reported genes of unknown function; Belongs to the RtcB family.	DEAD/DEAH box helicase-like protein.	0.597