Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LHA_2120Peptidase; Function of strongly homologous gene; enzyme. (301 aa)    
Predicted Functional Partners:
xseA
Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.866
LHA_2121
Putative rhomboid family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.852
LHA_0602
Membrane-bound metallopeptidase.
 
   
 0.762
nlpD
Novel lipoprotein homolog.
 
   
 0.756
LHA_2116
Homologs of previously reported genes of unknown function.
       0.752
LHA_2117
Homologs of previously reported genes of unknown function.
       0.752
LHA_2118
Type I secretion outer membrane protein, TolC family precursor; Function of strongly homologous gene; transporter.
       0.752
amiC
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.528
mrcA
Penicillin-binding protein 1A [Includes: Penicillin-insensitive transglycosylase; Penicillin-sensitive transpeptidase].
  
   
 0.510
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.484
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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