STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2168Protein of unknown function; No homology to any previously reported sequences. (151 aa)    
Predicted Functional Partners:
LHA_2167
Fimbrial assembly protein pilQ (fragment).
 
 
 0.995
LHA_2170
Protein of unknown function; No homology to any previously reported sequences.
 
 
 0.992
LHA_2169
Protein of unknown function; No homology to any previously reported sequences.
 
 
 0.986
LHA_2171
Protein of unknown function; No homology to any previously reported sequences.
 
 
 0.921
LHA_2164
Putative DamX-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.569
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
       0.569
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.569
LHA_2150
Putative Type 4 fimbrial biogenesis protein PilE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.494
LHA_1980
Sulfate transporter, CysZ-type; Function of strongly homologous gene; transporter.
  
     0.492
pilC
Type 4 fimbrial assembly protein pilC.
    
 
 0.457
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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