Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LHA_2188Membrane protein of unknown function; No homology to any previously reported sequences. (541 aa)    
Predicted Functional Partners:
LHA_2186
Glycosyl transferase family 2.
 
  
 0.984
LHA_2185
Lipid A biosynthesis domain protein.
 
     0.877
LHA_2187
Putative membrane-associated phospholipid phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.841
pimF
Putative glycosyltransferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.804
LHA_0214
Dolichyl-phosphate beta-glucosyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.639
LHA_2189
SpoIVFB, Zn-dependent protease.
  
    0.634
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
     
 0.632
udg
UDP-glucose 6-dehydrogenase.
 
  
 0.547
LHA_0504
Putative Methionyl-tRNA formyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.443
degT
Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.435
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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