STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2280Bacterial surface antigen; Function of strongly homologous gene; membrane component. (549 aa)    
Predicted Functional Partners:
LHA_2281
Exported protein of unknown function; No homology to any previously reported sequences.
 
 
 0.996
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.803
mutS
DNA mismatch repair protein mutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.654
LHA_3127
Homologs of previously reported genes of unknown function.
  
     0.588
LHA_2283
Homologs of previously reported genes of unknown function.
       0.579
LHA_0799
Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.453
LHA_2441
Transcriptional regulator, MerR family (fragment).
 
     0.430
lptD
LPS-assembly protein lptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
   
 0.429
LHA_1632
Homologs of previously reported genes of unknown function.
  
     0.406
LHA_0060
Homologs of previously reported genes of unknown function; Belongs to the UPF0149 family.
  
     0.401
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.