STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpsFerritin and DNA-binding protein Dps; Function of strongly homologous gene; carrier; Belongs to the Dps family. (146 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.924
sdaC
Putative serine transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
   0.832
LHA_3040
Homologs of previously reported genes of unknown function.
   
    0.816
osmC
Peroxiredoxin osmC.
  
  
 0.793
wrbA
Putative conserved flavoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
  
 0.756
wrbA-2
Flavoprotein wrbA; Belongs to the WrbA family.
  
  
 0.756
bolA
Protein BolA; Belongs to the BolA/IbaG family.
   
  
 0.693
LHA_1088
Homologs of previously reported genes of unknown function.
   
    0.651
LHA_0294
Sigma 54 modulation protein YhbH.
  
  
 0.639
katG
Catalase-peroxidase 2; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
  
 0.603
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.