STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IcmFIcmF protein; Function of strongly homologous gene; factor. (974 aa)    
Predicted Functional Partners:
IcmH/DotU
Component of the Dot/Icm secretion system; Function of strongly homologous gene; membrane component.
 
 
 0.981
icmE/dotG
Component of the Dot/Icm secretion system. Major component of a channel; Function of strongly homologous gene; structure.
 
   
 0.864
LHA_2859
Homolog of LvrA protein.
  
     0.759
LHA_3178
Cysteine protease, papain C1 family.
  
     0.757
LHA_0943
Protein of unknown function; No homology to any previously reported sequences.
  
     0.753
LHA_1822
Homologs of previously reported genes of unknown function.
  
     0.736
LHA_2930
Homologs of previously reported genes of unknown function.
  
     0.723
LHA_3194
Putative helicase/relaxase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.694
LHA_1785
Homologs of previously reported genes of unknown function.
  
     0.687
LHA_1661
Homologs of previously reported genes of unknown function.
  
     0.678
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.