STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2416Diadenosine tetraphosphate (Ap4A) hydrolase, histidine triad family protein. (141 aa)    
Predicted Functional Partners:
LHA_2417
Protein of unknown function; No homology to any previously reported sequences.
       0.559
LHA_0069
Protein of unknown function; No homology to any previously reported sequences.
  
 
  0.425
LHA_1560
NAD-glutamate dehydrogenase; Function of strongly homologous gene; enzyme.
  
    0.425
LHA_2418
Protein of unknown function; No homology to any previously reported sequences; Belongs to the LysR transcriptional regulatory family.
       0.422
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.416
LHA_0240
Homologs of previously reported genes of unknown function.
  
     0.403
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.