Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2422Succinylglutamate desuccinylase/aspartoacylase family protein. (341 aa)    
Predicted Functional Partners:
rimK
Ribosomal protein S6 modification protein; Belongs to the RimK family.
 
     0.966
LHA_0303
Alpha-L-glutamate ligases, RimK family; Belongs to the RimK family.
 
     0.739
LHA_3147
Homologs of previously reported genes of unknown function.
 
     0.661
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.570
LHA_2426
Cytochrome oxidase assembly family protein (fragment).
       0.570
LHA_2427
Homologs of previously reported genes of unknown function.
       0.570
LHA_2428
Homologs of previously reported genes of unknown function.
       0.570
LHA_2424
Electron transport protein SCO1/SenC; Function of strongly homologous gene; carrier.
       0.553
astD
N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
   
 
  0.500
pepP
Xaa-Pro aminopeptidase.
     
 0.443
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.