STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimKRibosomal protein S6 modification protein; Belongs to the RimK family. (302 aa)    
Predicted Functional Partners:
LHA_2422
Succinylglutamate desuccinylase/aspartoacylase family protein.
 
     0.950
LHA_3147
Homologs of previously reported genes of unknown function.
 
     0.713
LHA_2424
Electron transport protein SCO1/SenC; Function of strongly homologous gene; carrier.
       0.534
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.534
LHA_2426
Cytochrome oxidase assembly family protein (fragment).
       0.534
LHA_2427
Homologs of previously reported genes of unknown function.
       0.534
LHA_2428
Homologs of previously reported genes of unknown function.
       0.534
LHA_2429
Homologs of previously reported genes of unknown function.
       0.439
kefC
Glutathione-regulated potassium-efflux system protein kefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.412
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.