Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LHA_2424Electron transport protein SCO1/SenC; Function of strongly homologous gene; carrier. (214 aa)    
Predicted Functional Partners:
LHA_2426
Cytochrome oxidase assembly family protein (fragment).
 
 0.987
LHA_2428
Homologs of previously reported genes of unknown function.
 
 
 0.959
coxB
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.937
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.935
LHA_0118
Cytochrome c oxidase assembly protein; Function of strongly homologous gene; enzyme.
 
 0.922
LHA_2427
Homologs of previously reported genes of unknown function.
 
     0.894
LHA_0015
Thiol-disulfide oxidoreductase ResA.
 
 
 0.879
cyoA
Ubiquinol oxidase subunit 2.
  
 0.858
LHA_2429
Homologs of previously reported genes of unknown function.
 
     0.784
rimK
Ribosomal protein S6 modification protein; Belongs to the RimK family.
       0.695
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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