STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osmY-2Periplasmic, osmotically inducible protein Y-like. (103 aa)    
Predicted Functional Partners:
LHA_2326
Homologs of previously reported genes of unknown function.
 
    0.772
LHA_2441
Transcriptional regulator, MerR family (fragment).
 
    0.772
cbpA
Curved DNA-binding protein.
       0.717
LHA_1047
Homologs of previously reported genes of unknown function; Belongs to the UPF0337 (CsbD) family.
 
    0.618
LHA_1848
Homologs of previously reported genes of unknown function.
  
    0.582
LHA_1155
Homologs of previously reported genes of unknown function.
 
     0.572
LHA_1154
Conserved hypothetical protein, CBS domain; Homologs of previously reported genes of unknown function.
       0.461
LHA_0576
Homologs of previously reported genes of unknown function.
  
    0.414
osmY
Osmotically inducible protein.
 
    0.408
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.