STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2467Serine-type D-Ala-D-Ala carboxypeptidase; Function of strongly homologous gene; enzyme. (395 aa)    
Predicted Functional Partners:
LHA_2466
Conserved protein of unknow function; Doubtful CDS.
       0.668
LHA_2465
Flavin containing monooxygenase.
       0.508
LHA_1119
Long-chain-fatty-acid--CoA ligase [Beta-ketoacyl synthase active site]; Function of strongly homologous gene; enzyme.
 
   
 0.445
LHA_1995
Beta-ketoacyl synthase (fragment).
 
   
 0.443
LHA_2609
Putative Aspartate racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.429
LHA_0521
Beta-lactamase domain-containing protein; No homology to any previously reported sequences;/product='fragment of protein of unknown function (part 2)'.
  
     0.420
LHA_1826
Peptidase M28 family protein; Function of strongly homologous gene; enzyme.
  
     0.415
LHA_0504
Putative Methionyl-tRNA formyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.411
LHA_1121
Putative Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter.
  
  
 0.404
LHA_0025
Glycosyl hydrolase.
 
  
 0.400
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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