STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2487Toxin secretion ABC transporter HlyB/MsbA family ATP-binding protein. (526 aa)    
Predicted Functional Partners:
LHA_2488
RND efflux membrane fusion protein.
   0.979
LHA_2489
Multidrug efflux protein, outer membrane component.
 
    0.973
LHA_2486
Homologs of previously reported genes of unknown function; Belongs to the LysR transcriptional regulatory family.
 
     0.883
LHA_2483
Homologs of previously reported genes of unknown function.
 
     0.845
LHA_2484
Homologs of previously reported genes of unknown function; Belongs to the UPF0753 family.
 
     0.833
LHA_2485
Putative NADH-ubiquinone oxidoreductase chain 5; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.776
lssD
Legionella secretion system protein D.
 
 
 0.669
LHA_3232
Putative HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.662
LHA_1274
Type I secretion membrane fusion protein, HlyD; Function of strongly homologous gene; transporter.
 
 
 0.654
LHA_2627
Homologs of previously reported genes of unknown function.
  
     0.587
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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