STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2488RND efflux membrane fusion protein. (329 aa)    
Predicted Functional Partners:
LHA_2489
Multidrug efflux protein, outer membrane component.
 
  0.990
LHA_2487
Toxin secretion ABC transporter HlyB/MsbA family ATP-binding protein.
   0.979
LHA_2484
Homologs of previously reported genes of unknown function; Belongs to the UPF0753 family.
 
     0.868
LHA_2486
Homologs of previously reported genes of unknown function; Belongs to the LysR transcriptional regulatory family.
       0.864
LHA_2483
Homologs of previously reported genes of unknown function.
 
     0.815
LHA_2485
Putative NADH-ubiquinone oxidoreductase chain 5; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.780
LHA_0065
Homologs of previously reported genes of unknown function.
  
  0.727
tolC
Outer membrane protein TolC.
   
  0.704
LHA_2118
Type I secretion outer membrane protein, TolC family precursor; Function of strongly homologous gene; transporter.
   
  0.704
LHA_0688
Putative HlyD-like secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.598
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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