STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2518Protein of unknown function; No homology to any previously reported sequences. (1666 aa)    
Predicted Functional Partners:
LHA_2960
Protein kinase domain-containing protein; No homology to any previously reported sequences.
 
   0.765
LHA_3123
Protein of unknown function; No homology to any previously reported sequences.
 
     0.760
LHA_1064
DNA polymerase III, epsilon subunit; Function of strongly homologous gene; enzyme.
  
  
 0.712
LHA_0292
Exported protein of unknown function; No homology to any previously reported sequences.
  
 
   0.694
trbP
TrbP mating pair formation protein.
  
     0.693
osmY
Osmotically inducible protein.
  
     0.691
LHA_2873
Homologs of previously reported genes of unknown function.
  
     0.667
LHA_0150
Methyltransferase; Function of strongly homologous gene; enzyme.
  
     0.651
LHA_3176
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.621
LHA_0153
Peptidase [Helix-turn-helix type domain]; Function of strongly homologous gene; enzyme.
  
     0.613
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.