STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2674ABC transport system periplasmic substrate binding protein. (307 aa)    
Predicted Functional Partners:
LHA_2673
Uncharacterized ABC transporter ATP-binding protein HI_1087.
 
 0.995
LHA_2672
ABC transporter, permease.
 
 0.993
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily; Function of strongly homologous gene; transporter.
  
 0.953
LHA_2675
Homologs of previously reported genes of unknown function.
 
   0.953
yrbE-2
Toluene transporter subunit: membrane component of ABC superfamily; Function of strongly homologous gene; transporter.
  
 0.922
LHA_2099
Toluene tolerance protein Ttg2C.
     
 0.904
LHA_2098
Signal peptide protein, toluene tolerance protein Ttg2D.
  
 0.903
LHA_2097
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 0.860
LHA_2458
ABC transport system permease protein; Function of strongly homologous gene; transporter.
  
 
 0.621
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
   0.602
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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