STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icmWIcmW. (151 aa)    
Predicted Functional Partners:
icmS
Component of Dot/Icm secretion system. Substrate recognition; Function of strongly homologous gene; factor.
    
 
 0.921
LHA_2712
IcmX protein.
     
 0.825
icmO/dotL
Component of Dot/Icm secretion system. ATPase; Function of strongly homologous gene; enzyme.
    
 
 0.820
IvgA
Virulence protein; Function of strongly homologous gene; putative factor.
    
 
 0.808
LHA_2624
Conjugative coupling factor TraD.
    
 
 0.752
icmV
Intracellular multiplication protein IcmV.
     
 0.693
dotB
Component of the Dot/Icm secretions system. ATPase; Function of strongly homologous gene; enzyme.
      
 0.591
icmP/dotM
Component of Dot/Icm secretion system. ATPase component; Homologs of previously reported genes of unknown function; structure.
      
 0.582
LHA_2708
DotA (fragment).
       0.569
dotA
Component of the Dot/Icm secretion system; Function of strongly homologous gene; membrane component.
       0.569
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.