Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2804Homologs of previously reported genes of unknown function. (247 aa)    
Predicted Functional Partners:
sul
Sulfate transporter.
 
 
0.922
xhtA
Endonuclease/exonuclease/phosphatase; Function of strongly homologous gene; enzyme.
       0.796
LHA_2806
Exodeoxyribonuclease III.
       0.796
LHA_0474
Putative transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 
 0.739
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
  
    0.730
wrbA-2
Flavoprotein wrbA; Belongs to the WrbA family.
       0.711
LHA_2484
Homologs of previously reported genes of unknown function; Belongs to the UPF0753 family.
  
    0.643
LHA_2808
Arsenate reductase; Belongs to the ArsC family.
       0.593
LHA_2802
Malate oxidoreductase.
       0.462
yvdB
Putative sulfate transporter yvdB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.449
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.