STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2809Protein of unknown function [STPK domain]; No homology to any previously reported sequences. (420 aa)    
Predicted Functional Partners:
LHA_1398
Protein of unknown function; No homology to any previously reported sequences.
 
     0.646
LHA_3152
Protein of unknown function; No homology to any previously reported sequences.
  
    0.645
LHA_0236
Homologs of previously reported genes of unknown function.
  
    0.572
LHA_1431
Protein of unknown function [SET domain]; No homology to any previously reported sequences.
  
     0.540
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
     0.533
LHA_2808
Arsenate reductase; Belongs to the ArsC family.
  
    0.529
LHA_0129
Protein of unknown function; No homology to any previously reported sequences.
 
  
 0.508
wrbA-2
Flavoprotein wrbA; Belongs to the WrbA family.
       0.502
xhtA
Endonuclease/exonuclease/phosphatase; Function of strongly homologous gene; enzyme.
 
     0.475
def-2
Peptide deformylase 1; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
 
     0.426
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.