STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phaCPoly(3-hydroxyalkanoate) polymerase. (616 aa)    
Predicted Functional Partners:
phbB-2
Acetoacetyl-CoA reductase.
  
 
 0.938
phbB
Acetoacetyl-CoA reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator;/product='putative Polyhydroxyalkanoate synthesis repressor PhaR (fragment)'.
  
 
 0.934
yfcX
YfcX enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.925
LHA_0095
Polyhydroxyalkanoic synthase.
  
  
 
0.916
LHA_2550
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.765
LHA_1532
Patatin.
 
     0.666
smc
Chromosome segregation SMC protein [10 coiled coil domains]; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.563
LHA_1497
Hydrolase.
  
     0.555
LHA_2910
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
       0.537
LHA_0661
Homologs of previously reported genes of unknown function.
 
     0.496
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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