Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHA_0012 | dtpB | LHA_0012 | LHA_3015 | Homologs of previously reported genes of unknown function; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Dipeptide and tripeptide permease B. | 0.473 |
LHA_2080 | dtpB | LHA_2080 | LHA_3015 | Homologs of previously reported genes of unknown function. | Dipeptide and tripeptide permease B. | 0.415 |
LHA_3014 | LHA_3016 | LHA_3014 | LHA_3016 | Homologs of previously reported genes of unknown function. | Membrane protein of unknown function; No homology to any previously reported sequences. | 0.586 |
LHA_3014 | dtpB | LHA_3014 | LHA_3015 | Homologs of previously reported genes of unknown function. | Dipeptide and tripeptide permease B. | 0.788 |
LHA_3016 | LHA_3014 | LHA_3016 | LHA_3014 | Membrane protein of unknown function; No homology to any previously reported sequences. | Homologs of previously reported genes of unknown function. | 0.586 |
LHA_3016 | LHA_3017 | LHA_3016 | LHA_3017 | Membrane protein of unknown function; No homology to any previously reported sequences. | Esterase of the alpha-beta hydrolase family. | 0.571 |
LHA_3016 | dtpB | LHA_3016 | LHA_3015 | Membrane protein of unknown function; No homology to any previously reported sequences. | Dipeptide and tripeptide permease B. | 0.642 |
LHA_3017 | LHA_3016 | LHA_3017 | LHA_3016 | Esterase of the alpha-beta hydrolase family. | Membrane protein of unknown function; No homology to any previously reported sequences. | 0.571 |
LHA_3017 | dtpB | LHA_3017 | LHA_3015 | Esterase of the alpha-beta hydrolase family. | Dipeptide and tripeptide permease B. | 0.478 |
dtpB | LHA_0012 | LHA_3015 | LHA_0012 | Dipeptide and tripeptide permease B. | Homologs of previously reported genes of unknown function; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.473 |
dtpB | LHA_2080 | LHA_3015 | LHA_2080 | Dipeptide and tripeptide permease B. | Homologs of previously reported genes of unknown function. | 0.415 |
dtpB | LHA_3014 | LHA_3015 | LHA_3014 | Dipeptide and tripeptide permease B. | Homologs of previously reported genes of unknown function. | 0.788 |
dtpB | LHA_3016 | LHA_3015 | LHA_3016 | Dipeptide and tripeptide permease B. | Membrane protein of unknown function; No homology to any previously reported sequences. | 0.642 |
dtpB | LHA_3017 | LHA_3015 | LHA_3017 | Dipeptide and tripeptide permease B. | Esterase of the alpha-beta hydrolase family. | 0.478 |