Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LHA_3038Putative Stage V sporulation protein R; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor. (508 aa)    
Predicted Functional Partners:
LHA_3039
Homologs of previously reported genes of unknown function; Belongs to the UPF0229 family.
 
  
 0.998
LHA_3040
Homologs of previously reported genes of unknown function.
 
  
 0.997
ldh
Leucine dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.693
pepN
Aminopeptidase N.
       0.650
LHA_1572
Predicted nucleoside-diphosphate sugar epimerase.
   
    0.464
LHA_3036
Protein of unknown function; No homology to any previously reported sequences.
       0.436
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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