STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_3048Tubulin--tyrosine ligase [TTL domain]; Function of strongly homologous gene; enzyme. (336 aa)    
Predicted Functional Partners:
ydcO
Putative benzoate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.803
LHA_1823
Conserved protein of unknown function [F-BOX/LEUCINE RICH REPEAT PROTEIN]; Homologs of previously reported genes of unknown function.
  
     0.716
LHA_0593
Conserved protein of unknown function [ankyrin repeat]; Homologs of previously reported genes of unknown function.
  
     0.623
LHA_1354
Putative coiled-coil protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.622
LHA_2960
Protein kinase domain-containing protein; No homology to any previously reported sequences.
  
     0.619
LHA_3120
Putative methyltransferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.605
ydcN
Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.601
LHA_1431
Protein of unknown function [SET domain]; No homology to any previously reported sequences.
  
     0.594
LHA_2837
Uncharacterized protein; Gene remnant;/product='fragment of Integrase/recombinase XerD, putative'.
  
     0.584
iraA
Small-molecule methyltransferase IraA; Function of strongly homologous gene; enzyme.
  
     0.580
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.