STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_3100Ribonuclease, T2 family; Belongs to the RNase T2 family. (327 aa)    
Predicted Functional Partners:
LHA_3105
Homologs of previously reported genes of unknown function.
 
     0.598
LHA_3098
Homologs of previously reported genes of unknown function.
       0.586
yhiN
Putative oxidoreductase with FAD/NAD(P)-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.559
LHA_1557
Putative phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.539
LHA_3109
Homologs of previously reported genes of unknown function.
 
     0.535
LHA_3106
TPR repeat containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.503
LHA_3107
Homologs of previously reported genes of unknown function.
 
     0.489
LHA_2722
Putative Transcriptional regulator, LuxR family with an autoinducer-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.453
LHA_1155
Homologs of previously reported genes of unknown function.
  
     0.434
iraA
Small-molecule methyltransferase IraA; Function of strongly homologous gene; enzyme.
  
     0.433
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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