STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_3106TPR repeat containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (304 aa)    
Predicted Functional Partners:
LHA_3107
Homologs of previously reported genes of unknown function.
     0.994
LHA_2597
Protein of unknown function [coiled-coil domain]; No homology to any previously reported sequences.
  
 0.972
LHA_3105
Homologs of previously reported genes of unknown function.
 
 
 0.954
LHA_3110
Homologs of previously reported genes of unknown function.
 
  
 0.950
LHA_3108
Homologs of previously reported genes of unknown function.
 
   
 0.949
LHA_3109
Homologs of previously reported genes of unknown function.
 
   
 0.948
LHA_3111
ATPase associated with various cellular activities, AAA_3; Function of strongly homologous gene; enzyme.
 
   
 0.937
htpG
Chaperone protein htpG; Molecular chaperone. Has ATPase activity.
   
 0.824
LHA_3104
Amidase; Function of strongly homologous gene; enzyme; Belongs to the amidase family.
   
   0.784
cspA-3
Cold shock-like protein CspA.
       0.773
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.