STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_3159Homologs of previously reported genes of unknown function; Belongs to the methyltransferase superfamily. (220 aa)    
Predicted Functional Partners:
yraL
Putative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.661
LHA_1346
Putative excinuclease ABC, C subunit, N-terminal; Function of strongly homologous gene; enzyme.
  
  
 0.619
LHA_2481
Chitinase; Function of strongly homologous gene; enzyme.
  
     0.619
legA
Conserved protein of unknown function [ankyrin repeat]; Homologs of previously reported genes of unknown function.
  
     0.602
LHA_3158
PAS sensor histidine kinase domain protein.
 
   
 0.601
LHA_1595
Homologs of previously reported genes of unknown function.
  
     0.583
LHA_1684
Putative mechanosensitive ion channel MscS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
     0.581
plaB
Phospholipase.
 
     0.574
LHA_1647
Putative FAD/FMN-containing dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.558
LHA_2721
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.543
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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