STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_3188Homologs of previously reported genes of unknown function. (222 aa)    
Predicted Functional Partners:
LHA_3189
Homologs of previously reported genes of unknown function.
 
     0.885
amiC
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.618
LHA_3194
Putative helicase/relaxase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.588
LHA_3191
ABC transporter, permease protein.
 
     0.576
legA
Conserved protein of unknown function [ankyrin repeat]; Homologs of previously reported genes of unknown function.
  
     0.571
LHA_2566
Homologs of previously reported genes of unknown function.
 
     0.565
LHA_2723
Membrane protein of unknown function; No homology to any previously reported sequences.
 
   
 0.551
LHA_1873
Protein with patatin domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.531
plaB
Phospholipase.
  
     0.505
lolD-3
Lipoprotein-releasing system ATP-binding protein LolD 1.
       0.497
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.