STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_3252Acyl CoA dehydrogenase, short chain specific. (569 aa)    
Predicted Functional Partners:
yfcX
YfcX enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.995
GCDH
Glutaryl-CoA dehydrogenase, mitochondrial.
  
  
  0.961
LHA_1307
3-hydroxyisobutyryl-CoA hydrolase; Function of strongly homologous gene; enzyme.
 
 0.956
LHA_0914
Acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.955
phbA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.947
LHA_1543
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.947
fadA
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.947
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein/.
  
 0.944
Mccc
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
 
 
 0.938
MCCC
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
  
 0.919
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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