STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_3258Exported protein of unknown function; No homology to any previously reported sequences. (112 aa)    
Predicted Functional Partners:
cueO
Multicopper oxidase; Function of strongly homologous gene; enzyme.
   
 
 0.813
LHA_3259
Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.743
legP
Astacin; Function of strongly homologous gene; enzyme.
       0.547
LHA_2008
Putative FAD dependent oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.448
alkB
Alkane 1-monooxygenase 1; Gene remnant;/product='fragment of protein of unknown function'.
 
    0.442
LHA_2011
Natural resistance-associated macrophage protein; Function of strongly homologous gene; transporter.
  
     0.439
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.415
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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