STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_3260Putative FAD dependent oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (397 aa)    
Predicted Functional Partners:
LHA_3259
Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.852
LHA_2226
Putative Naringenin-chalcone synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.702
etfB
Electron transfer flavoprotein subunit beta.
  
 
 0.653
LHA_1130
Phytoene synthase; Function of strongly homologous gene; enzyme.
  
  
 0.623
etfdh
Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.621
LHA_2609
Putative Aspartate racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.595
LHA_3261
Homologs of previously reported genes of unknown function.
       0.554
plaB
Phospholipase.
  
     0.505
LHA_2481
Chitinase; Function of strongly homologous gene; enzyme.
  
     0.483
LHA_2913
Protein of unknown function; No homology to any previously reported sequences.
 
  
 0.483
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.