Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHL35230.1 | SHL42224.1 | SAMN05660971_00283 | SAMN05660971_00516 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport. | 0.765 |
| SHL42224.1 | SHL35230.1 | SAMN05660971_00516 | SAMN05660971_00283 | Transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.765 |
| SHL42224.1 | SHM93132.1 | SAMN05660971_00516 | SAMN05660971_04295 | Transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport. | Chorismate mutase. | 0.430 |
| SHL42224.1 | gcvP | SAMN05660971_00516 | SAMN05660971_00758 | Transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.588 |
| SHM93132.1 | SHL42224.1 | SAMN05660971_04295 | SAMN05660971_00516 | Chorismate mutase. | Transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport. | 0.430 |
| SHM93132.1 | gcvP | SAMN05660971_04295 | SAMN05660971_00758 | Chorismate mutase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.432 |
| gcvP | SHL42224.1 | SAMN05660971_00758 | SAMN05660971_00516 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport. | 0.588 |
| gcvP | SHM93132.1 | SAMN05660971_00758 | SAMN05660971_04295 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Chorismate mutase. | 0.432 |