Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL45938.1 | SHL45962.1 | SAMN05660971_00635 | SAMN05660971_00636 | Hypothetical protein. | 6-pyruvoyl tetrahydropterin synthase. | 0.874 |
SHL45938.1 | SHL46055.1 | SAMN05660971_00635 | SAMN05660971_00639 | Hypothetical protein. | Putative protease. | 0.715 |
SHL45938.1 | SHL46080.1 | SAMN05660971_00635 | SAMN05660971_00640 | Hypothetical protein. | Ribosome association toxin PasT (RatA) of the RatAB toxin-antitoxin module. | 0.643 |
SHL45938.1 | SHL81139.1 | SAMN05660971_00635 | SAMN05660971_01414 | Hypothetical protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.613 |
SHL45938.1 | SHM21197.1 | SAMN05660971_00635 | SAMN05660971_02417 | Hypothetical protein. | FAD/FMN-containing dehydrogenase. | 0.503 |
SHL45938.1 | SHM84610.1 | SAMN05660971_00635 | SAMN05660971_04044 | Hypothetical protein. | ATP-binding cassette, subfamily B. | 0.503 |
SHL45938.1 | SHM94677.1 | SAMN05660971_00635 | SAMN05660971_04343 | Hypothetical protein. | FAD/FMN-containing dehydrogenase. | 0.503 |
SHL45938.1 | queC | SAMN05660971_00635 | SAMN05660971_00638 | Hypothetical protein. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.874 |
SHL45938.1 | queE | SAMN05660971_00635 | SAMN05660971_00637 | Hypothetical protein. | 7-carboxy-7-deazaguanine synthase, Cx14CxxC type; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.874 |
SHL45938.1 | rpsJ | SAMN05660971_00635 | SAMN05660971_03339 | Hypothetical protein. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.519 |
SHL45962.1 | SHL45938.1 | SAMN05660971_00636 | SAMN05660971_00635 | 6-pyruvoyl tetrahydropterin synthase. | Hypothetical protein. | 0.874 |
SHL45962.1 | SHL46055.1 | SAMN05660971_00636 | SAMN05660971_00639 | 6-pyruvoyl tetrahydropterin synthase. | Putative protease. | 0.576 |
SHL45962.1 | SHL46080.1 | SAMN05660971_00636 | SAMN05660971_00640 | 6-pyruvoyl tetrahydropterin synthase. | Ribosome association toxin PasT (RatA) of the RatAB toxin-antitoxin module. | 0.643 |
SHL45962.1 | queC | SAMN05660971_00636 | SAMN05660971_00638 | 6-pyruvoyl tetrahydropterin synthase. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.990 |
SHL45962.1 | queE | SAMN05660971_00636 | SAMN05660971_00637 | 6-pyruvoyl tetrahydropterin synthase. | 7-carboxy-7-deazaguanine synthase, Cx14CxxC type; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.992 |
SHL46055.1 | SHL45938.1 | SAMN05660971_00639 | SAMN05660971_00635 | Putative protease. | Hypothetical protein. | 0.715 |
SHL46055.1 | SHL45962.1 | SAMN05660971_00639 | SAMN05660971_00636 | Putative protease. | 6-pyruvoyl tetrahydropterin synthase. | 0.576 |
SHL46055.1 | SHL46080.1 | SAMN05660971_00639 | SAMN05660971_00640 | Putative protease. | Ribosome association toxin PasT (RatA) of the RatAB toxin-antitoxin module. | 0.491 |
SHL46055.1 | queC | SAMN05660971_00639 | SAMN05660971_00638 | Putative protease. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.622 |
SHL46055.1 | queE | SAMN05660971_00639 | SAMN05660971_00637 | Putative protease. | 7-carboxy-7-deazaguanine synthase, Cx14CxxC type; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.578 |
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