Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL38898.1 | SHL50150.1 | SAMN05660971_00400 | SAMN05660971_00765 | Two-component system, NarL family, sensor histidine kinase BarA. | LysM domain-containing protein. | 0.571 |
SHL38898.1 | SHL50185.1 | SAMN05660971_00400 | SAMN05660971_00766 | Two-component system, NarL family, sensor histidine kinase BarA. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.559 |
SHL38898.1 | SHM44855.1 | SAMN05660971_00400 | SAMN05660971_03002 | Two-component system, NarL family, sensor histidine kinase BarA. | Acyl transferase domain-containing protein. | 0.960 |
SHL50049.1 | SHL50083.1 | SAMN05660971_00762 | SAMN05660971_00763 | Alkylated DNA repair dioxygenase AlkB. | Undecaprenyl-diphosphatase. | 0.819 |
SHL50049.1 | SHL50121.1 | SAMN05660971_00762 | SAMN05660971_00764 | Alkylated DNA repair dioxygenase AlkB. | Glycosyltransferase involved in cell wall bisynthesis. | 0.787 |
SHL50049.1 | SHL50150.1 | SAMN05660971_00762 | SAMN05660971_00765 | Alkylated DNA repair dioxygenase AlkB. | LysM domain-containing protein. | 0.674 |
SHL50049.1 | SHL50185.1 | SAMN05660971_00762 | SAMN05660971_00766 | Alkylated DNA repair dioxygenase AlkB. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.675 |
SHL50083.1 | SHL50049.1 | SAMN05660971_00763 | SAMN05660971_00762 | Undecaprenyl-diphosphatase. | Alkylated DNA repair dioxygenase AlkB. | 0.819 |
SHL50083.1 | SHL50121.1 | SAMN05660971_00763 | SAMN05660971_00764 | Undecaprenyl-diphosphatase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.917 |
SHL50083.1 | SHL50150.1 | SAMN05660971_00763 | SAMN05660971_00765 | Undecaprenyl-diphosphatase. | LysM domain-containing protein. | 0.764 |
SHL50083.1 | SHL50185.1 | SAMN05660971_00763 | SAMN05660971_00766 | Undecaprenyl-diphosphatase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.763 |
SHL50083.1 | SHM23550.1 | SAMN05660971_00763 | SAMN05660971_02486 | Undecaprenyl-diphosphatase. | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | 0.562 |
SHL50083.1 | SHM44855.1 | SAMN05660971_00763 | SAMN05660971_03002 | Undecaprenyl-diphosphatase. | Acyl transferase domain-containing protein. | 0.677 |
SHL50121.1 | SHL50049.1 | SAMN05660971_00764 | SAMN05660971_00762 | Glycosyltransferase involved in cell wall bisynthesis. | Alkylated DNA repair dioxygenase AlkB. | 0.787 |
SHL50121.1 | SHL50083.1 | SAMN05660971_00764 | SAMN05660971_00763 | Glycosyltransferase involved in cell wall bisynthesis. | Undecaprenyl-diphosphatase. | 0.917 |
SHL50121.1 | SHL50150.1 | SAMN05660971_00764 | SAMN05660971_00765 | Glycosyltransferase involved in cell wall bisynthesis. | LysM domain-containing protein. | 0.753 |
SHL50121.1 | SHL50185.1 | SAMN05660971_00764 | SAMN05660971_00766 | Glycosyltransferase involved in cell wall bisynthesis. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.746 |
SHL50121.1 | SHM44855.1 | SAMN05660971_00764 | SAMN05660971_03002 | Glycosyltransferase involved in cell wall bisynthesis. | Acyl transferase domain-containing protein. | 0.624 |
SHL50150.1 | SHL38898.1 | SAMN05660971_00765 | SAMN05660971_00400 | LysM domain-containing protein. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.571 |
SHL50150.1 | SHL50049.1 | SAMN05660971_00765 | SAMN05660971_00762 | LysM domain-containing protein. | Alkylated DNA repair dioxygenase AlkB. | 0.674 |
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