STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL50185.11-acyl-sn-glycerol-3-phosphate acyltransferase. (291 aa)    
Predicted Functional Partners:
SHL50150.1
LysM domain-containing protein.
       0.874
SHM44855.1
Acyl transferase domain-containing protein.
  
 0.779
SHL50083.1
Undecaprenyl-diphosphatase.
   
 0.763
SHM23550.1
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
 
 
 0.754
SHL50121.1
Glycosyltransferase involved in cell wall bisynthesis.
    
  0.746
SHL50049.1
Alkylated DNA repair dioxygenase AlkB.
       0.675
SHL50256.1
3-oxoacid CoA-transferase subunit A.
       0.637
SHL38898.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
 
  0.559
SHL50217.1
LysR family transcriptional regulator, carnitine catabolism transcriptional activator; Belongs to the LysR transcriptional regulatory family.
       0.551
SHL50278.1
3-oxoacid CoA-transferase subunit B.
       0.493
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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