Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL60274.1 | SHL61200.1 | SAMN05660971_00904 | SAMN05660971_00931 | Pimeloyl-ACP methyl ester carboxylesterase. | Cobalt-zinc-cadmium efflux system protein. | 0.488 |
SHL61200.1 | SHL60274.1 | SAMN05660971_00931 | SAMN05660971_00904 | Cobalt-zinc-cadmium efflux system protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.488 |
SHL61200.1 | SHL61232.1 | SAMN05660971_00931 | SAMN05660971_00932 | Cobalt-zinc-cadmium efflux system protein. | Transcriptional regulator, ArsR family. | 0.447 |
SHL61200.1 | SHM08162.1 | SAMN05660971_00931 | SAMN05660971_02089 | Cobalt-zinc-cadmium efflux system protein. | Transferrin binding protein-like solute binding protein. | 0.465 |
SHL61232.1 | SHL61200.1 | SAMN05660971_00932 | SAMN05660971_00931 | Transcriptional regulator, ArsR family. | Cobalt-zinc-cadmium efflux system protein. | 0.447 |
SHM08162.1 | SHL61200.1 | SAMN05660971_02089 | SAMN05660971_00931 | Transferrin binding protein-like solute binding protein. | Cobalt-zinc-cadmium efflux system protein. | 0.465 |