STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL63965.1Glycine/D-amino acid oxidase. (429 aa)    
Predicted Functional Partners:
SHL99057.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.959
SHM46151.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.959
SHM87997.1
Glutamate synthase (NADPH) large subunit.
  
 
 0.817
SHM35410.1
L-glutamine synthetase.
 
 
  0.797
SHM34996.1
Glutamine synthetase.
 
 
  0.774
SHL29197.1
Gamma-glutamylputrescine oxidase.
  
  
 
0.710
SHM33470.1
Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.698
SHM35355.1
Gamma-glutamylputrescine oxidase.
  
  
 
0.688
SHL64039.1
Glycine/D-amino acid oxidase.
 
    
0.662
SHM35569.1
Gamma-glutamylputrescine oxidase.
  
  
 
0.643
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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