Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL36977.1 | SHM62914.1 | SAMN05660971_00336 | SAMN05660971_03440 | Agmatine/peptidylarginine deiminase. | Agmatinase; Belongs to the arginase family. | 0.904 |
SHL36977.1 | aguA | SAMN05660971_00336 | SAMN05660971_03076 | Agmatine/peptidylarginine deiminase. | Agmatine deiminase. | 0.938 |
SHL36977.1 | hutG | SAMN05660971_00336 | SAMN05660971_03871 | Agmatine/peptidylarginine deiminase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.555 |
SHL36977.1 | speA | SAMN05660971_00336 | SAMN05660971_01512 | Agmatine/peptidylarginine deiminase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.551 |
SHL67860.1 | SHM62914.1 | SAMN05660971_01135 | SAMN05660971_03440 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Agmatinase; Belongs to the arginase family. | 0.425 |
SHL67860.1 | aguA | SAMN05660971_01135 | SAMN05660971_03076 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Agmatine deiminase. | 0.619 |
SHL67860.1 | argH | SAMN05660971_01135 | SAMN05660971_03657 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Argininosuccinate lyase. | 0.571 |
SHL67860.1 | hutG | SAMN05660971_01135 | SAMN05660971_03871 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.425 |
SHL67860.1 | speA | SAMN05660971_01135 | SAMN05660971_01512 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.561 |
SHL83898.1 | polA | SAMN05660971_01514 | SAMN05660971_01515 | Protein of unknown function. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.727 |
SHL83898.1 | speA | SAMN05660971_01514 | SAMN05660971_01512 | Protein of unknown function. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.758 |
SHL83898.1 | thrB | SAMN05660971_01514 | SAMN05660971_01513 | Protein of unknown function. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.850 |
SHL94868.1 | SHM62914.1 | SAMN05660971_01777 | SAMN05660971_03440 | Aspartate aminotransferase. | Agmatinase; Belongs to the arginase family. | 0.619 |
SHL94868.1 | argH | SAMN05660971_01777 | SAMN05660971_03657 | Aspartate aminotransferase. | Argininosuccinate lyase. | 0.709 |
SHL94868.1 | hutG | SAMN05660971_01777 | SAMN05660971_03871 | Aspartate aminotransferase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.619 |
SHL94868.1 | speA | SAMN05660971_01777 | SAMN05660971_01512 | Aspartate aminotransferase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.782 |
SHM62914.1 | SHL36977.1 | SAMN05660971_03440 | SAMN05660971_00336 | Agmatinase; Belongs to the arginase family. | Agmatine/peptidylarginine deiminase. | 0.904 |
SHM62914.1 | SHL67860.1 | SAMN05660971_03440 | SAMN05660971_01135 | Agmatinase; Belongs to the arginase family. | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | 0.425 |
SHM62914.1 | SHL94868.1 | SAMN05660971_03440 | SAMN05660971_01777 | Agmatinase; Belongs to the arginase family. | Aspartate aminotransferase. | 0.619 |
SHM62914.1 | aguA | SAMN05660971_03440 | SAMN05660971_03076 | Agmatinase; Belongs to the arginase family. | Agmatine deiminase. | 0.638 |
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