STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL86226.1Benzoate/toluate 1,2-dioxygenase alpha subunit. (454 aa)    
Predicted Functional Partners:
SHL86251.1
Benzoate/toluate 1,2-dioxygenase beta subunit.
 
 0.999
SHL86277.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
 
 
 0.991
SHL86301.1
Dihydroxycyclohexadiene carboxylate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.990
SHL86203.1
Catechol 1,2-dioxygenase.
 
  
 0.923
SHL86182.1
Muconolactone delta-isomerase.
 
  
 0.894
SHL99185.1
Ferredoxin-NADP reductase.
 
 
 0.859
SHL86159.1
Muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.848
SHL86322.1
Benzoate membrane transport protein.
 
     0.774
SHL99057.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
 0.725
SHM46151.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
 0.725
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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