STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL98476.1Phosphonate transport system ATP-binding protein. (252 aa)    
Predicted Functional Partners:
SHL98437.1
Phosphonate transport system substrate-binding protein.
 
 
 0.997
SHL98505.1
Phosphonate transport system permease protein.
 
 
 0.995
SHM61899.1
Phosphonate transport system substrate-binding protein.
 
 
 0.958
SHM09995.1
Phosphonate transport system substrate-binding protein.
 
 
 0.946
SHM09907.1
Phosphonate transport system permease protein.
 
 
 0.928
SHM61924.1
Phosphonate transport system permease protein.
 
 
 0.925
SHM09934.1
Phosphonate transport system permease protein.
 
 
 0.900
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 
0.832
phnC-2
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 
0.829
SHM62119.1
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL.
 
    0.757
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.