STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM08858.1Zinc/manganese transport system permease protein. (300 aa)    
Predicted Functional Partners:
SHM08829.1
Zinc/manganese transport system ATP-binding protein.
 
 0.994
SHM08891.1
Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.994
SHM69570.1
Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.969
SHM69595.1
Manganese/zinc/iron transport system ATP-binding protein.
 
 0.946
znuC
Zinc transport system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
 0.901
SHL80796.1
Zinc transport system substrate-binding protein.
 
 
 0.896
SHL80763.1
Zinc transport system substrate-binding protein.
  
 
 0.819
SHL80856.1
Zinc transport system permease protein.
  
  
 
0.789
SHM69660.1
Manganese/zinc/iron transport system permease protein.
  
  
 
0.534
SHM69630.1
Manganese/zinc/iron transport system permease protein.
  
  
 
0.533
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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