Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL26654.1 | SHL33370.1 | SAMN05660971_00002 | SAMN05660971_00230 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | 0.697 |
SHL26654.1 | SHM13432.1 | SAMN05660971_00002 | SAMN05660971_02271 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.596 |
SHL26654.1 | SHM32219.1 | SAMN05660971_00002 | SAMN05660971_02688 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.665 |
SHL33370.1 | SHL26654.1 | SAMN05660971_00230 | SAMN05660971_00002 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.697 |
SHL33370.1 | SHL69844.1 | SAMN05660971_00230 | SAMN05660971_01207 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.700 |
SHL33370.1 | SHM13432.1 | SAMN05660971_00230 | SAMN05660971_02271 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.783 |
SHL33370.1 | SHM32219.1 | SAMN05660971_00230 | SAMN05660971_02688 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.914 |
SHL33370.1 | SHM74289.1 | SAMN05660971_00230 | SAMN05660971_03738 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.706 |
SHL69844.1 | SHL33370.1 | SAMN05660971_01207 | SAMN05660971_00230 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | 0.700 |
SHL69844.1 | SHM13432.1 | SAMN05660971_01207 | SAMN05660971_02271 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.596 |
SHL69844.1 | SHM32219.1 | SAMN05660971_01207 | SAMN05660971_02688 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.662 |
SHL81386.1 | SHL92738.1 | SAMN05660971_01424 | SAMN05660971_01703 | Glucarate dehydratase-related protein. | Galactarate dehydratase. | 0.843 |
SHL81386.1 | SHM13432.1 | SAMN05660971_01424 | SAMN05660971_02271 | Glucarate dehydratase-related protein. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.490 |
SHL92712.1 | SHL92738.1 | SAMN05660971_01702 | SAMN05660971_01703 | D-glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Galactarate dehydratase. | 0.953 |
SHL92712.1 | SHM13432.1 | SAMN05660971_01702 | SAMN05660971_02271 | D-glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.500 |
SHL92738.1 | SHL81386.1 | SAMN05660971_01703 | SAMN05660971_01424 | Galactarate dehydratase. | Glucarate dehydratase-related protein. | 0.843 |
SHL92738.1 | SHL92712.1 | SAMN05660971_01703 | SAMN05660971_01702 | Galactarate dehydratase. | D-glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.953 |
SHL92738.1 | SHM13432.1 | SAMN05660971_01703 | SAMN05660971_02271 | Galactarate dehydratase. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.457 |
SHM13382.1 | SHM13409.1 | SAMN05660971_02269 | SAMN05660971_02270 | Proton-dependent oligopeptide transporter, POT family. | Proline iminopeptidase. | 0.795 |
SHM13382.1 | SHM13432.1 | SAMN05660971_02269 | SAMN05660971_02271 | Proton-dependent oligopeptide transporter, POT family. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.483 |
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