STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM23352.1Two component transcriptional regulator, LuxR family. (220 aa)    
Predicted Functional Partners:
SHL38898.1
Two-component system, NarL family, sensor histidine kinase BarA.
  
 0.991
SHL86415.1
Two-component system, NarL family, sensor histidine kinase EvgS.
   
 0.984
SHL66025.1
Signal transduction histidine kinase.
 
 0.977
SHL66095.1
Signal transduction histidine kinase.
 
 0.977
SHM79457.1
Signal transduction histidine kinase.
 
 0.977
SHM27641.1
PAS domain S-box-containing protein.
 
 0.975
SHL42079.1
Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX.
 
 0.853
SHM09872.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.836
SHM61597.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.760
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.757
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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