Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL51728.1 | SHL51763.1 | SAMN05660971_00812 | SAMN05660971_00813 | UTP--glucose-1-phosphate uridylyltransferase. | UDPglucose 6-dehydrogenase. | 0.995 |
SHL51728.1 | SHM00301.1 | SAMN05660971_00812 | SAMN05660971_01978 | UTP--glucose-1-phosphate uridylyltransferase. | Nucleotidyl transferase. | 0.748 |
SHL51728.1 | SHM44217.1 | SAMN05660971_00812 | SAMN05660971_02981 | UTP--glucose-1-phosphate uridylyltransferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.665 |
SHL51728.1 | SHM44285.1 | SAMN05660971_00812 | SAMN05660971_02983 | UTP--glucose-1-phosphate uridylyltransferase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.930 |
SHL51728.1 | SHM44338.1 | SAMN05660971_00812 | SAMN05660971_02985 | UTP--glucose-1-phosphate uridylyltransferase. | Phosphoglucomutase. | 0.971 |
SHL51728.1 | SHM44368.1 | SAMN05660971_00812 | SAMN05660971_02986 | UTP--glucose-1-phosphate uridylyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.472 |
SHL51728.1 | SHM44648.1 | SAMN05660971_00812 | SAMN05660971_02995 | UTP--glucose-1-phosphate uridylyltransferase. | Glycosyltransferase, GT2 family. | 0.842 |
SHL51728.1 | SHM61487.1 | SAMN05660971_00812 | SAMN05660971_03391 | UTP--glucose-1-phosphate uridylyltransferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.468 |
SHL51728.1 | SHM84358.1 | SAMN05660971_00812 | SAMN05660971_04033 | UTP--glucose-1-phosphate uridylyltransferase. | Phosphomannomutase / phosphoglucomutase. | 0.985 |
SHL51763.1 | SHL51728.1 | SAMN05660971_00813 | SAMN05660971_00812 | UDPglucose 6-dehydrogenase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.995 |
SHL51763.1 | SHM00301.1 | SAMN05660971_00813 | SAMN05660971_01978 | UDPglucose 6-dehydrogenase. | Nucleotidyl transferase. | 0.519 |
SHL51763.1 | SHM44217.1 | SAMN05660971_00813 | SAMN05660971_02981 | UDPglucose 6-dehydrogenase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.844 |
SHL51763.1 | SHM44285.1 | SAMN05660971_00813 | SAMN05660971_02983 | UDPglucose 6-dehydrogenase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.852 |
SHL51763.1 | SHM44368.1 | SAMN05660971_00813 | SAMN05660971_02986 | UDPglucose 6-dehydrogenase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.833 |
SHL51763.1 | SHM44648.1 | SAMN05660971_00813 | SAMN05660971_02995 | UDPglucose 6-dehydrogenase. | Glycosyltransferase, GT2 family. | 0.436 |
SHL51763.1 | SHM84358.1 | SAMN05660971_00813 | SAMN05660971_04033 | UDPglucose 6-dehydrogenase. | Phosphomannomutase / phosphoglucomutase. | 0.405 |
SHM00301.1 | SHL51728.1 | SAMN05660971_01978 | SAMN05660971_00812 | Nucleotidyl transferase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.748 |
SHM00301.1 | SHL51763.1 | SAMN05660971_01978 | SAMN05660971_00813 | Nucleotidyl transferase. | UDPglucose 6-dehydrogenase. | 0.519 |
SHM00301.1 | SHM44217.1 | SAMN05660971_01978 | SAMN05660971_02981 | Nucleotidyl transferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.911 |
SHM00301.1 | SHM44249.1 | SAMN05660971_01978 | SAMN05660971_02982 | Nucleotidyl transferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.615 |
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