STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM45314.1Heat shock protein HslJ. (153 aa)    
Predicted Functional Partners:
SHL45906.1
AAA ATPase domain-containing protein.
  
     0.715
SHM09698.1
Ribonucleoside-diphosphate reductase alpha chain.
  
     0.669
SHL49236.1
Hypothetical protein.
  
     0.657
SHL60139.1
Hypothetical protein.
  
     0.655
SHM10315.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.634
SHL42298.1
Chromosome segregation ATPase.
  
     0.604
SHL47176.1
Nucleoside-diphosphate-sugar epimerase.
  
     0.590
SHM74990.1
Adenosylcobinamide kinase.
  
     0.584
SHM45589.1
Membrane-bound lysozyme-inhibitor of c-type lysozyme.
 
     0.576
SHM91412.1
Tripartite tricarboxylate transporter TctB family protein.
  
     0.571
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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