STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM47323.1Mannitol 2-dehydrogenase. (499 aa)    
Predicted Functional Partners:
SHM79403.1
Phosphocarrier protein FPr; Belongs to the PEP-utilizing enzyme family.
  
 
 0.980
SHM80103.1
Mannonate dehydratase.
 
  
 0.910
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.902
xylB
Xylulokinase.
 
  
 0.877
SHM79347.1
PTS system, fructose-specific IIC component.
  
 
 0.877
SHM47441.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
  
  0.823
SHL98103.1
Fructokinase.
    
 0.822
SHM47566.1
Sorbitol/mannitol transport system substrate-binding protein.
 
     0.816
SHM47502.1
Sorbitol/mannitol transport system permease protein.
 
  
 0.790
SHM47533.1
Sorbitol/mannitol transport system permease protein.
 
    0.757
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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