Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL37934.1 | SHL42136.1 | SAMN05660971_00368 | SAMN05660971_00513 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Aromatic-amino-acid transaminase. | 0.907 |
SHL37934.1 | SHL93523.1 | SAMN05660971_00368 | SAMN05660971_01729 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.929 |
SHL37934.1 | SHM42476.1 | SAMN05660971_00368 | SAMN05660971_02928 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Cysteine desulfurase. | 0.920 |
SHL37934.1 | SHM51883.1 | SAMN05660971_00368 | SAMN05660971_03145 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.928 |
SHL37934.1 | SHM54596.1 | SAMN05660971_00368 | SAMN05660971_03248 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.910 |
SHL37934.1 | SHM54655.1 | SAMN05660971_00368 | SAMN05660971_03250 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.731 |
SHL37934.1 | SHM94561.1 | SAMN05660971_00368 | SAMN05660971_04337 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Phosphoadenylylsulfate reductase (thioredoxin). | 0.947 |
SHL37934.1 | glpE | SAMN05660971_00368 | SAMN05660971_01970 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide. | 0.918 |
SHL37934.1 | metZ | SAMN05660971_00368 | SAMN05660971_00495 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.907 |
SHL42136.1 | SHL37934.1 | SAMN05660971_00513 | SAMN05660971_00368 | Aromatic-amino-acid transaminase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.907 |
SHL42136.1 | SHL93523.1 | SAMN05660971_00513 | SAMN05660971_01729 | Aromatic-amino-acid transaminase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.907 |
SHL42136.1 | SHM42476.1 | SAMN05660971_00513 | SAMN05660971_02928 | Aromatic-amino-acid transaminase. | Cysteine desulfurase. | 0.496 |
SHL42136.1 | SHM51883.1 | SAMN05660971_00513 | SAMN05660971_03145 | Aromatic-amino-acid transaminase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.907 |
SHL42136.1 | SHM54655.1 | SAMN05660971_00513 | SAMN05660971_03250 | Aromatic-amino-acid transaminase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.853 |
SHL42136.1 | metZ | SAMN05660971_00513 | SAMN05660971_00495 | Aromatic-amino-acid transaminase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.610 |
SHL93523.1 | SHL37934.1 | SAMN05660971_01729 | SAMN05660971_00368 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.929 |
SHL93523.1 | SHL42136.1 | SAMN05660971_01729 | SAMN05660971_00513 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Aromatic-amino-acid transaminase. | 0.907 |
SHL93523.1 | SHM42476.1 | SAMN05660971_01729 | SAMN05660971_02928 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Cysteine desulfurase. | 0.920 |
SHL93523.1 | SHM51883.1 | SAMN05660971_01729 | SAMN05660971_03145 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.926 |
SHL93523.1 | SHM54596.1 | SAMN05660971_01729 | SAMN05660971_03248 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.910 |
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