STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM69989.1Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. (159 aa)    
Predicted Functional Partners:
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
   
 
  0.900
SHM63821.1
Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase.
  
     0.757
SHL63737.1
PhnB protein.
 
  
 0.754
SHL63707.1
Hypothetical protein.
 
     0.617
SHL94977.1
Dihydrofolate reductase.
 
    0.611
SHM61735.1
Hypothetical protein.
   
    0.559
SHM12503.1
Predicted dithiol-disulfide oxidoreductase, DUF899 family.
 
     0.483
SHL81467.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
    0.449
SHL45771.1
Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family.
 
    0.436
SHM15741.1
Uncharacterized conserved protein YbaA, DUF1428 family.
 
     0.416
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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