Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM86563.1 | SHM86585.1 | SAMN05660971_04094 | SAMN05660971_04095 | Hypothetical protein. | Hypothetical protein. | 0.841 |
SHM86563.1 | SHM86610.1 | SAMN05660971_04094 | SAMN05660971_04096 | Hypothetical protein. | General secretion pathway protein L. | 0.841 |
SHM86563.1 | SHM86632.1 | SAMN05660971_04094 | SAMN05660971_04097 | Hypothetical protein. | General secretion pathway protein K. | 0.862 |
SHM86563.1 | SHM86654.1 | SAMN05660971_04094 | SAMN05660971_04098 | Hypothetical protein. | General secretion pathway protein J. | 0.812 |
SHM86563.1 | SHM86682.1 | SAMN05660971_04094 | SAMN05660971_04099 | Hypothetical protein. | General secretion pathway protein I. | 0.838 |
SHM86563.1 | SHM86702.1 | SAMN05660971_04094 | SAMN05660971_04100 | Hypothetical protein. | Type IV pilin N-term methylation site GFxxxE. | 0.811 |
SHM86563.1 | SHM86724.1 | SAMN05660971_04094 | SAMN05660971_04101 | Hypothetical protein. | Type II secretion system protein G (GspG). | 0.812 |
SHM86563.1 | SHM86757.1 | SAMN05660971_04094 | SAMN05660971_04102 | Hypothetical protein. | General secretion pathway protein F. | 0.726 |
SHM86563.1 | SHM86807.1 | SAMN05660971_04094 | SAMN05660971_04104 | Hypothetical protein. | General secretion pathway protein D. | 0.711 |
SHM86563.1 | SHM86822.1 | SAMN05660971_04094 | SAMN05660971_04105 | Hypothetical protein. | Type IV pilus biogenesis. | 0.698 |
SHM86585.1 | SHM86563.1 | SAMN05660971_04095 | SAMN05660971_04094 | Hypothetical protein. | Hypothetical protein. | 0.841 |
SHM86585.1 | SHM86610.1 | SAMN05660971_04095 | SAMN05660971_04096 | Hypothetical protein. | General secretion pathway protein L. | 0.841 |
SHM86585.1 | SHM86632.1 | SAMN05660971_04095 | SAMN05660971_04097 | Hypothetical protein. | General secretion pathway protein K. | 0.841 |
SHM86585.1 | SHM86654.1 | SAMN05660971_04095 | SAMN05660971_04098 | Hypothetical protein. | General secretion pathway protein J. | 0.812 |
SHM86585.1 | SHM86682.1 | SAMN05660971_04095 | SAMN05660971_04099 | Hypothetical protein. | General secretion pathway protein I. | 0.838 |
SHM86585.1 | SHM86702.1 | SAMN05660971_04095 | SAMN05660971_04100 | Hypothetical protein. | Type IV pilin N-term methylation site GFxxxE. | 0.811 |
SHM86585.1 | SHM86724.1 | SAMN05660971_04095 | SAMN05660971_04101 | Hypothetical protein. | Type II secretion system protein G (GspG). | 0.812 |
SHM86585.1 | SHM86757.1 | SAMN05660971_04095 | SAMN05660971_04102 | Hypothetical protein. | General secretion pathway protein F. | 0.726 |
SHM86585.1 | SHM86807.1 | SAMN05660971_04095 | SAMN05660971_04104 | Hypothetical protein. | General secretion pathway protein D. | 0.711 |
SHM86585.1 | SHM86822.1 | SAMN05660971_04095 | SAMN05660971_04105 | Hypothetical protein. | Type IV pilus biogenesis. | 0.698 |
page 1 of 6