STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM92189.1ferredoxin--NADP+ reductase. (258 aa)    
Predicted Functional Partners:
SHL86277.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
    
0.721
SHM92168.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.593
SHL86226.1
Benzoate/toluate 1,2-dioxygenase alpha subunit.
  
 
 0.515
SHL38081.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
   
 0.491
SHL65520.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
   
 
 0.487
SHM88019.1
Glutamate synthase (NADPH/NADH) small chain.
     
 0.470
SHM76537.1
Probable FeS assembly SUF system protein SufT.
  
 
 0.461
SHM34707.1
Omega-6 fatty acid desaturase (delta-12 desaturase).
  
 
 0.459
SHL99185.1
Ferredoxin-NADP reductase.
    
 
0.458
SHM28049.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
  
 0.440
Your Current Organism:
Halomonas cupida
NCBI taxonomy Id: 44933
Other names: ATCC 27124, Alcaligenes cupidus, CCUG 16075, CIP 103199, DSM 4740, Deleya cupida, H. cupida, JCM 20632, LMG 3448, LMG:3448, NBRC 102219, strain 79
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